The detailed information of tRNA gene sequence


Sequence ID>W131218094
Genome IDATXJ01000004
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus islandicus DSM 21543 [ATXJ]
Start position on genome 149348
End posion on genome 149272
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cctggcgccg
tRNA gene sequence
GGCGGCGTAGCTCAGGTGGTCAGAGCACACGACTCATAATCGTGGTGTCGTGGGTTCGAG
TCCCACCGCCGCCACCA
Downstream region at tRNA end position
gggggcccct
Secondary structure (Cloverleaf model)
>W131218094	Met	CAT
                   g      ACCA gggggcccct
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      G G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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