The detailed information of tRNA gene sequence


Sequence ID>W131167526
Genome IDARDI01000013
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus oshimai DSM 12092 [ARDI]
Start position on genome 27869
End posion on genome 27944
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccctaggcgg
tRNA gene sequence 
GGGCCGTTAGCTCAACTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGGAGGTTCGAGT
CCTTCACGGCCCGCCA
Downstream region at tRNA end position 
catcgcccct
Secondary structure (Cloverleaf model)
>W131167526	Trp	CCA
                   g      GCCA catcgcccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T T C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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