The detailed information of tRNA gene sequence


Sequence ID>W131100405
Genome IDAOUN01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingopyxis sp. MC1 [AOUN]
Start position on genome 162703
End posion on genome 162627
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcctttcgg
tRNA gene sequence 
GGCGGAGTAGCTCAGCAGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
tttttctgtt
Secondary structure (Cloverleaf model)
>W131100405	Met	CAT
                   g      ACCA tttttctgtt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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