The detailed information of tRNA gene sequence


Sequence ID>W131230832
Genome IDAUHY01000071
Search identical group
Phylum/ClassDeinococcota
SpeciesMeiothermus rufus DSM 22234 [AUHY]
Start position on genome 6638
End posion on genome 6562
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggttaggtgg
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTGAGAGCAAGCGACTCATAATCGCCAGGTCGCGGGTTCAAG
TCCTGCACGGCCCACCA
Downstream region at tRNA end position 
agcccccctt
Secondary structure (Cloverleaf model)
>W131230832	Met	CAT
                   g      ACCA agcccccctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T G A        A     AGGTC
                    A   C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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