The detailed information of tRNA gene sequence


Sequence ID>W131167651
Genome IDARDL01000007
Search identical group
Phylum/ClassDeinococcota
SpeciesCalidithermus timidus DSM 17022 [ARDL]
Start position on genome 253336
End posion on genome 253245
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctgcgccgt
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGTTGAAGGGGCACGCCTGGAGAGCGTGTATAGGGCGTTCGCTC
TATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gcagcagggg
Secondary structure (Cloverleaf model)
>W131167651	Ser	GGA
                   t      GCCA gcagcagggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    T       A G G G
      T G A        G     TATAGGGCGTTCGCTCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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