The detailed information of tRNA gene sequence


Sequence ID>W131209923
Genome IDATJG01000075
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis JCP8481A [ATJG]
Start position on genome 22144
End posion on genome 22218
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttgaaagcct
tRNA gene sequence 
CGGGGTGTAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCGAA
TCCTGTCACCCCGACtt
Downstream region at tRNA end position 
ttgaaacccg
Secondary structure (Cloverleaf model)
>W131209923	Pro	TGG
                   t      ACtt ttgaaacccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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