The detailed information of tRNA gene sequence


Sequence ID>C000007
Genome IDAE000657
Search identical group
Phylum/ClassAquificota
SpeciesAquifex aeolicus VF5 [AE000657]
Start position on genome 727371
End posion on genome 727465
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aagaatagaa
tRNA gene sequence 
GGGAGAGGTTGGCCGGCTGGTGCCGCCCCGGGACTTCAAATCCCGTGGGAGGTCCCGCAA
GGGAGCTCCGGAGGGTTCGATTCCCTCCCTCTCCCgcca
Downstream region at tRNA end position 
ataagttgtt
Secondary structure (Cloverleaf model)
>C000007	SeC	TCA
                   a      gcca ataagttgtt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C T C C C     A
      C G G        T      | | | | |     G
    T       C C G G       G A G G G     C
    G         | | |                 T T
    G       C G C C
      T G C        C     TGGGAGGTCCCGCAAGGGAGCTCCG
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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