The detailed information of tRNA gene sequence


Sequence ID>C000025
Genome IDAE000657
Search identical group
Phylum/ClassAquificota
SpeciesAquifex aeolicus VF5 [AE000657]
Start position on genome 1376079
End posion on genome 1376002
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tacactggct
tRNA gene sequence 
GGAGCGGTAGTTCAGCCCGGTCAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCAA
ATCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
ttcctatctt
Secondary structure (Cloverleaf model)
>C000025	Asp	GTC
                   t      GCCA ttcctatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
    C C G A        A      + | | | |     A
  C         C T T G       G C G G G     C
  G         | | | |                 T T
  G         G A A C
    T C A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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