The detailed information of tRNA gene sequence


Sequence ID>C000035
Genome IDAE000657
Search identical group
Phylum/ClassAquificota
SpeciesAquifex aeolicus VF5 [AE000657]
Start position on genome 643683
End posion on genome 643592
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttttgtaaa
tRNA gene sequence 
GGAGGGGTGGCCGAGAGGCCGAAGGCGGCCGCTTGCTAAGCGGCAGAGGGGCTAAAACCC
CTCCGAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
ttatccgtaa
Secondary structure (Cloverleaf model)
>C000035	Ser	GCT
                   a      GCCA ttatccgtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     AGAGGGGCTAAAACCCCTCC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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