The detailed information of tRNA gene sequence


Sequence ID>C000040
Genome IDAE000657
Search identical group
Phylum/ClassAquificota
SpeciesAquifex aeolicus VF5 [AE000657]
Start position on genome 450480
End posion on genome 450405
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tttgtcgtaa
tRNA gene sequence 
GGCCCGGTAGCTCAGGTGGTAGAGCACCCGGCTGAAAACCGGGGTGTCGGCGGTTCGACT
CCGCCCTGGGCCACCA
Downstream region at tRNA end position 
ctatcttacc
Secondary structure (Cloverleaf model)
>C000040	Phe	GAA
                   a      ACCA ctatcttacc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C          T C
                    T     C C G C C     A
      G G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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