The detailed information of tRNA gene sequence


Sequence ID>W131175104
Genome IDARIZ01000020
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThioalkalivibrio sp. ALJ24 [ARIZ]
Start position on genome 125300
End posion on genome 125376
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgagcaccc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGTCGGTTCGAG
TCCGACCGGGCCCACCA
Downstream region at tRNA end position 
ctcgcttgca
Secondary structure (Cloverleaf model)
>W131175104	Met	CAT
                   c      ACCA ctcgcttgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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