The detailed information of tRNA gene sequence


Sequence ID>C011841
Genome IDAM180252
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesLawsonia intracellularis PHE/MN1-00 [AM180252]
Start position on genome 236707
End posion on genome 236618
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ataaatactt
tRNA gene sequence 
GGAAGCGTATTGCCACCGGTGTGGTACTTGGTCTTCAAAACCAGTGTCAGGCTGAGAGGT
CTGAGGTAGGTTCGACTCCTATACGCTTCCgcca
Downstream region at tRNA end position 
Taattgaatt
Secondary structure (Cloverleaf model)
>C011841	SeC	TCA
                   t      gcca Taattgaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C C G T       G T A G G     C
    G       | | + |                 T T
    T       G G T A
      G T          C     TGTCAGGCTGAGAGGTCTGAG
                    T + G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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