The detailed information of tRNA gene sequence


Sequence ID>C021781
Genome IDAE005674
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShigella flexneri 2a str. 301 [AE005674]
Start position on genome 3956441
End posion on genome 3956516
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caccctaatt
tRNA gene sequence 
AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGT
CTCTCCGCCCCTGCCG
Downstream region at tRNA end position 
aaatcatcct
Secondary structure (Cloverleaf model)
>C021781	Trp	CCA
                   t      GCCG aaatcatcct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G A G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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