The detailed information of tRNA gene sequence


Sequence ID>C022929
Genome IDAE014299
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShewanella oneidensis MR-1 [AE014299]
Start position on genome 1880184
End posion on genome 1880260
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgtagaccat
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCACCCGCCTTCTAAGCGGGTGGTCGCAGGTTCGAA
TCCTGCCGGGCGTACCA
Downstream region at tRNA end position 
gtttcagtgg
Secondary structure (Cloverleaf model)
>C022929	Arg	TCT
                   t      ACCA gtttcagtgg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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