The detailed information of tRNA gene sequence


Sequence ID>w021592
Genome IDAAVT01000008
Search identical group
Phylum/ClassGammaproteobacteria
Speciesmarine gamma proteobacterium HTCC2143 [AAVT]
Start position on genome 150219
End posion on genome 150297
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaaattatcT
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGCACTACACTGGGGGTGTAGTGGTCGCAGGTTCAAA
TCCTGCCGTTCCGACCA
Downstream region at tRNA end position 
Tatagatcaa
Secondary structure (Cloverleaf model)
>w021592	Pro	GGG
                   T      ACCA Tatagatcaa
                     C - G
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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