The detailed information of tRNA gene sequence


Sequence ID>w020847
Genome IDAAVE01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesDinoroseobacter shibae DFL 12 [AAVE]
Start position on genome 1089420
End posion on genome 1089342
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccattcggT
tRNA gene sequence 
CGGGCTGTAGCGCAGCCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAGGTTCGAA
TCCTCTCAGCCCGACCA
Downstream region at tRNA end position 
Aatggttccc
Secondary structure (Cloverleaf model)
>w020847	Pro	CGG
                   T      ACCA Aatggttccc
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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