The detailed information of tRNA gene sequence


Sequence ID>w016095
Genome IDAAPV01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HTCC1002 [AAPV]
Start position on genome 53584
End posion on genome 53506
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caactaaagT
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGATCGCCTGTCACGCGATAGGTCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
Ctttttccct
Secondary structure (Cloverleaf model)
>w016095	Asp	GTC
                   T      GCCA Ctttttccct
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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