The detailed information of tRNA gene sequence


Sequence ID>w013888
Genome IDAANZ01000013
Search identical group
Phylum/ClassPlanctomycetota
SpeciesBlastopirellula marina DSM 3645 [AANZ]
Start position on genome 111337
End posion on genome 111411
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caaatgacac
tRNA gene sequence 
GGCGCCGTAGCCAAGTGGCTAAGGCAGTGGATTGCAAATCCACCATCCCCGGTTCGAATC
CGGGCGGCGCCTCTT
Downstream region at tRNA end position 
gatctaaccc
Secondary structure (Cloverleaf model)
>w013888	Cys	GCA
                   c      TCTT gatctaaccc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      T G A        A      | | | | |     G
    G       A C C G       C C C G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     CATC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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