The detailed information of tRNA gene sequence


Sequence ID>C171072762
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 4436791
End posion on genome 4436718
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttttgat
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCAGAGCAGAGGAATCATAATCCTCGTGTCCGGGGTTCAAGT
CCCTGCGCCGCTACtt
Downstream region at tRNA end position 
ttttttattg
Secondary structure (Cloverleaf model)
>C171072762	Met	CAT
                   t      ACtt ttttttattg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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