The detailed information of tRNA gene sequence


Sequence ID>C171114006
Genome IDCP020873
Search identical group
Phylum/ClassChlorobiota
SpeciesProsthecochloris sp. HL-130-GSB [CP020873]
Start position on genome 1711804
End posion on genome 1711880
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gactcaggcc
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTTAGAGCAAGCGACTCATAATCGCTAGGTCGTAGGTTCAAG
TCCTACAGGGCCCACAA
Downstream region at tRNA end position 
gcccttcatc
Secondary structure (Cloverleaf model)
>C171114006	Met	CAT
                   c      ACAA gcccttcatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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