The detailed information of tRNA gene sequence


Sequence ID>W141000105
Genome IDAADL01001629
Search identical group
Phylum/ClassUnclassified
Speciesmine drainage metagenome Group III [AADL]
Start position on genome 9833
End posion on genome 9759
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tacaaaagat
tRNA gene sequence 
AGGTCCGTGGTGTAAAGGATATCATATGGGCCTCCGGAGCCCATGATCCGGGTTCAATTC
CCGGTGGACCTGCTA
Downstream region at tRNA end position 
ttctattact
Secondary structure (Cloverleaf model)
>W141000105	Arg	CCG
                   t      GCTA ttctattact
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G + T          T T
                    T     G G C C C     A
      A A A        G      | | | | |     A
    G       T G T G       C C G G G     C
    G         | | +                 T T
    A       T C A T
      T A          A     TGAT
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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