The detailed information of tRNA gene sequence


Sequence ID>W141000115
Genome IDAADL01001671
Search identical group
Phylum/ClassUnclassified
Speciesmine drainage metagenome Group III [AADL]
Start position on genome 1663
End posion on genome 1580
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
tgaggtacaa
tRNA gene sequence
GCTGGGATAGCCTAGCCTGGTAAGGCGCAAGTCTGGAAAGCTTGTGCTCCTGTAGCTCGG
GAGTTCGAATCTCCCTCCCAGCGCtt
Downstream region at tRNA end position
tatgaaattt
Secondary structure (Cloverleaf model)
>W141000115	Ser	GGA
                   a      GCtt tatgaaattt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        A      | | | | |     G
    C       T C C G       G G G A G     C
    T       | | | |                 T T
    G       A G G C
      G T A        G     TGCTCCTGTAGCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    T + G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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