The detailed information of tRNA gene sequence


Sequence ID>WENV180019900
Genome IDFTCS01001122
Search identical group
Phylum/Class[FTCS] metagenome; soil
Species
Start position on genome 6914
End posion on genome 7010
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcgcgcgtcg
tRNA gene sequence 
GGAAGTGCGTGGTGAACTGGCGTCACCCCCGGTCTTCAAAGCCGGAGTGAGGCGGCTCAG
CCGTCTCGGGCAGGTTCGATTCCTGTGCGCTTCCGCCg
Downstream region at tRNA end position 
atggatacgg
Secondary structure (Cloverleaf model)
>WENV180019900	SeC	TCA
                   g      GCCg atggatacgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C
                     C - G          T T
                    G     T G T C C     A
      C A A        T      + | | | |     G
    T       G T G G       G C A G G     C
    G       | | | |                 T T
    G       C A C C
      C G T        C     AGTGAGGCGGCTCAGCCGTCTCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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