The detailed information of tRNA gene sequence


Sequence ID>W141000524
Genome IDADEM01000003
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis 75712 [ADEM]
Start position on genome 303501
End posion on genome 303588
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctacaaagt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTAAGCGGC
TCGAGAGTTCGAATCTCTCTGACTCCGCgg
Downstream region at tRNA end position 
ttttagctct
Secondary structure (Cloverleaf model)
>W141000524	Ser	GCT
                   t      GCgg ttttagctct
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G A G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTAAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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