The detailed information of tRNA gene sequence


Sequence ID>WENV180028400
Genome IDFTJA01198882
Search identical group
Phylum/Class[FTJA] metagenome; soil
Species
Start position on genome 88
End posion on genome 183
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgatgcggat
tRNA gene sequence 
GGAGGAGAGTCGTCCCTGGTGGGGCGCTCGGACTTCAAATCCGAGTGGGGCAGCGAGCCT
GTCCCAGGTGGGTTCGACTCCCATTCTCTTCCGCCA
Downstream region at tRNA end position 
tccgcgcccc
Secondary structure (Cloverleaf model)
>WENV180028400	SeC	TCA
                   t      GCCA tccgcgcccc
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    G     T A C C C     A
      T C C        T      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          C     GTGGGGCAGCGAGCCTGTCCCAG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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