The detailed information of tRNA gene sequence


Sequence ID>WENV180033197
Genome IDFTKF01032771
Search identical group
Phylum/Class[FTKF] metagenome; soil
Species
Start position on genome 137
End posion on genome 42
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctagttccac
tRNA gene sequence 
GGAAGGCATACTCATCCGGTGATGGGGCCGGGCTTCAAACCCGGTGGAGGGCGTCAGACG
CTCCCCTGTAAGTTCGACTCCTACTGCCTTCCGCCA
Downstream region at tRNA end position 
tttaccgcgg
Secondary structure (Cloverleaf model)
>WENV180033197	SeC	TCA
                   c      GCCA tttaccgcgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C A T C C     A
      C C T        A      | | |   |     G
    G       A C T C       G T A A G     C
    G       | | + |                 T T
    T       T G G G
      G A          G     TGGAGGGCGTCAGACGCTCCCCT
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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