The detailed information of tRNA gene sequence


Sequence ID>WENV180038604
Genome IDLLBY010000546
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 41255
End posion on genome 41168
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taatcttttt
tRNA gene sequence 
GGCGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAACCTTTGCGGGT
TCCGTGGGTTCGAATCCCACTCTCGCCTttt
Downstream region at tRNA end position 
atttctaaat
Secondary structure (Cloverleaf model)
>WENV180038604	Ser	TGA
                   t      Tttt atttctaaat
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAACCTTTGCGGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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