The detailed information of tRNA gene sequence


Sequence ID>WENV180038617
Genome IDLLBY010000615
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 47485
End posion on genome 47398
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtctcataaa
tRNA gene sequence 
GGACGGCGCTGGGGTTGGCTCCCCAAACGCATTGGAAATGCGTAGGCACCCGCAAGGGTG
GATGGTTCGATGCCATCGTCGTCCGCCA
Downstream region at tRNA end position 
tggcggttta
Secondary structure (Cloverleaf model)
>WENV180038617	Ser	GGA
                   a      GCCA tggcggttta
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G + T
                     C - G          G T
                    G     C T A C C     A
      T T G        C      | | | | |     G
    G       G G G T       G A T G G     C
    G       | | | |                 T T
    C       C C C A
      T C          A     AGGCACCCGCAAGGGTG
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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