The detailed information of tRNA gene sequence


Sequence ID>WENV180038678
Genome IDLLBY010001775
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 22567
End posion on genome 22651
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATCCCATGTTCGTAAGAACTCG
TGGGTTCGAATCCCACTCCCCGCGCtt
Downstream region at tRNA end position 
atcttgggga
Secondary structure (Cloverleaf model)
>WENV180038678	Ser	GCT
                   n      GCtt atcttgggga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGTAAGAACTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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