The detailed information of tRNA gene sequence


Sequence ID>WENV180038687
Genome IDLLBY010002092
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 14609
End posion on genome 14514
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgagctacct
tRNA gene sequence 
GGAGGCGTCCGAGCGCCTGGTGGGCTCCCCGGTCTTCAAAACCGGTGAGGGGTCGATACG
GTCCCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
cctgtccaca
Secondary structure (Cloverleaf model)
>WENV180038687	SeC	TCA
                   t      GCCA cctgtccaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C G        C      + | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     TGAGGGGTCGATACGGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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