The detailed information of tRNA gene sequence


Sequence ID>WENV180038872
Genome IDLLBY010009620
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 4450
End posion on genome 4540
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccacacacc
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTTAAGGAGACCGTCTTGAAAACGGTTGTGGCCCAAAAGGCC
ACCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gcccgattct
Secondary structure (Cloverleaf model)
>WENV180038872	Ser	TGA
                   c      GCCA gcccgattct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTGGCCCAAAAGGCCACC
                    A - T
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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