The detailed information of tRNA gene sequence


Sequence ID>WENV180038875
Genome IDLLBY010009741
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1076
End posion on genome 979
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAAGCGAACGGGGCCCGGTGGCCCTCCCGGTCTTCAAAACCGGTCGCTGCCCGCGTTGA
GCGGGCGGGCTGGGTTCGACTCCCAGGCGCTTCCGCCA
Downstream region at tRNA end position 
ttcactcgcc
Secondary structure (Cloverleaf model)
>WENV180038875	SeC	TCA
                   n      GCCA ttcactcgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T C
                    A     G A C C C     A
      C C C        C      | | | | |     G
    G       G G G G       C T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TCGCTGCCCGCGTTGAGCGGGCGGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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