The detailed information of tRNA gene sequence


Sequence ID>WENV180038990
Genome IDLLBY010017934
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 2682
End posion on genome 2773
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaattcagcc
tRNA gene sequence 
GGTGAGGTGGATGAGTGGCTGAAATCAACGGTTTGCTAAACCGTCGTACGACCTTAAAGT
TGTACCGAGGGTTCGAATCCCTCCCTCACCGCag
Downstream region at tRNA end position 
tttgggattt
Secondary structure (Cloverleaf model)
>WENV180038990	Ser	GCT
                   c      GCag tttgggattt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         | | |                 T T
    C       A A T C
      T G A        A     CGTACGACCTTAAAGTTGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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