The detailed information of tRNA gene sequence


Sequence ID>WENV180039020
Genome IDLLBY010019745
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 5221
End posion on genome 5308
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccagcctaat
tRNA gene sequence 
GGAACGGTGCCAGAGCGGCCTATCGGGCATCCCTGCTAAGGATGTGTAGTTGAAAATCTA
CCGTGGGTTCGAATCCCACTCGTTCCGCac
Downstream region at tRNA end position 
aaaacaagta
Secondary structure (Cloverleaf model)
>WENV180039020	Ser	GCT
                   t      GCac aaaacaagta
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    C       T C G G
      C T A        G     TGTAGTTGAAAATCTACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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