The detailed information of tRNA gene sequence


Sequence ID>WENV180039032
Genome IDLLBY010021088
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 23061
End posion on genome 23151
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgttaacac
tRNA gene sequence 
GGAGAGGTACCCAAGTGGCTGAAGGGGCTGGATTGCTAATCCGGTAGGTCGGCGTTAGCC
GGCGCGAGGGTTCGAATCCCTCCCTCTCCGCac
Downstream region at tRNA end position 
gtgatacgat
Secondary structure (Cloverleaf model)
>WENV180039032	Ser	GCT
                   c      GCac gtgatacgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGTCGGCGTTAGCCGGCGC
                    C - G
                    T + G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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