The detailed information of tRNA gene sequence


Sequence ID>WENV180039038
Genome IDLLBY010021879
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 10774
End posion on genome 10858
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttcatcat
tRNA gene sequence 
GGCTCGTAAGGTCTCCGGGTGATCAGCAGGCTCATATCCTGCCGCTTTTAAAGCAAAGTT
GGTTCGATTCCAACACGAGCTACCA
Downstream region at tRNA end position 
gttttatatt
Secondary structure (Cloverleaf model)
>WENV180039038	Met	CAT
                   t      ACCA gttttatatt
                     G + T
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    A     C A A C C     A
        C T        A      | | | | |     G
      C     C T G G       G T T G G     C
      G     | | + |                 T T
      G     G A T C
        G T        A     CGCTTTTAAAGCAAA
                    G - C
                    C - G
                    A - T
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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