The detailed information of tRNA gene sequence


Sequence ID>WENV180039042
Genome IDLLBY010021887
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1267
End posion on genome 1361
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtatcgccgt
tRNA gene sequence 
GGAGGAGTAACCGGGGCGGTCTCCGGCGCGGTCTTCAAAACCGTTGAGGGGCGTAGGACG
TTCCTTGTGGGTTCGACTCCCACACTCTTCCGCCA
Downstream region at tRNA end position 
accgcccaaa
Secondary structure (Cloverleaf model)
>WENV180039042	SeC	TCA
                   t      GCCA accgcccaaa
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A          T C
                    A     C A C C C     A
      C G G        A      | | | | |     G
    G       G G C C       G T G G G     C
    G       | | | |                 T T
    T       C C G G
      C T          C     TGAGGGGCGTAGGACGTTCCTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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