The detailed information of tRNA gene sequence


Sequence ID>WENV180039059
Genome IDLLBY010023027
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 288
End posion on genome 373
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgaccgcctc
tRNA gene sequence 
GGCGGGGTTCCGGAGCGGTCGAACGGGGCGGTCTTGAAAACCGTTGAGCCGCAAGGCTCC
GTGGGTTCGAATCCCACCCCCGCCGCtg
Downstream region at tRNA end position 
tcgtgcgcgc
Secondary structure (Cloverleaf model)
>WENV180039059	Ser	TGA
                   c      GCtg tcgtgcgcgc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        T      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGAGCCGCAAGGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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