The detailed information of tRNA gene sequence


Sequence ID>WENV180039107
Genome IDLLBY010027273
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 2269
End posion on genome 2346
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgaacccctg
tRNA gene sequence 
AGGGGTGTAGCTCTAATTGGTTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGA
GTCCCTCCACCCCTGCCA
Downstream region at tRNA end position 
ggagagtgtt
Secondary structure (Cloverleaf model)
>WENV180039107	Trp	CCA
                   g      GCCA ggagagtgtt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
    T A A T        A      | + | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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