The detailed information of tRNA gene sequence


Sequence ID>WENV180039116
Genome IDLLBY010028247
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 3826
End posion on genome 3737
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccccgcgcc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGACGAATGCGGCGGTCTCGAAAACCGTTATCCGTCGTTAGGCG
GATCGAGGGTTCGAATCCCTCCCCCTCCGCtc
Downstream region at tRNA end position 
caaagcgcgg
Secondary structure (Cloverleaf model)
>WENV180039116	Ser	CGA
                   c      GCtc caaagcgcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    A       A T G C
      C G A        G     TATCCGTCGTTAGGCGGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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