The detailed information of tRNA gene sequence


Sequence ID>WENV180039163
Genome IDLLBY010030845
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 13779
End posion on genome 13687
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
cctgcaacgc
tRNA gene sequence
GGAGGCGTCAGGGTTCCTGGTGGGCCCCCCGGTCTTCAAAACCGGTGTGGGGGCGAGAGC
TCCCAGGCGGGTTCGATTCCCGTCCGCCTCCGCga
Downstream region at tRNA end position
aagggggagc
Secondary structure (Cloverleaf model)
>WENV180039163	SeC	TCA
                   c      GCga aagggggagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C T        A      + | | | |     G
    T       T G G G       G C G G G     C
    G       + | | |                 T T
    G       G C C C
      T G G        C     TGTGGGGGCGAGAGCTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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