The detailed information of tRNA gene sequence


Sequence ID>WENV180039203
Genome IDLLBY010036551
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 53
End posion on genome 129
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggcagaatt
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGCTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
cgnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180039203	Trp	CCA
                   t      GCCA cgnnnnnnnn
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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