The detailed information of tRNA gene sequence


Sequence ID>WENV180039259
Genome IDLLBY010043312
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1138
End posion on genome 1053
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgagccgccc
tRNA gene sequence 
GGCGGGGTTCCGGAGCGGTCGAACGGGGCGGCCTTGAAAGCCGTTGAGCCGCAAGGCTCC
GTGGGTTCGAATCCCACCCCCGCCGCtg
Downstream region at tRNA end position 
tggcttccgg
Secondary structure (Cloverleaf model)
>WENV180039259	Ser	TGA
                   c      GCtg tggcttccgg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        T      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGAGCCGCAAGGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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