The detailed information of tRNA gene sequence


Sequence ID>WENV180039281
Genome IDLLBY010046462
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1235
End posion on genome 1145
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagtagatgt
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGCCGAAGGCACTCCCCTGCTAAGGGAGCATACCTCAAAAGGGT
ATCGGGGGTTCGACTCCCCCCTTCTCCGCCA
Downstream region at tRNA end position 
ttgaattcaa
Secondary structure (Cloverleaf model)
>WENV180039281	Ser	GCT
                   t      GCCA ttgaattcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        A     CATACCTCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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