The detailed information of tRNA gene sequence


Sequence ID>WENV180039300
Genome IDLLBY010049633
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 200
End posion on genome 297
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gacaggtact
tRNA gene sequence 
GGGAGCGCATCGGGTCTGGTGGCCCGGCCGGTCTTCAAAACCGCGTCGGAGGCGCCTCGC
GCGTCTTTGGTGGGTTCGATTCCCACACGCTCTCGCCA
Downstream region at tRNA end position 
cttgtctgcg
Secondary structure (Cloverleaf model)
>WENV180039300	SeC	TCA
                   t      GCCA cttgtctgcg
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       G G G C       G T G G G     C
    G       | | | |                 T T
    T       C C C G
      G G          G     GTCGGAGGCGCCTCGCGCGTCTTTG
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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