The detailed information of tRNA gene sequence


Sequence ID>WENV180039370
Genome IDLLBY010058932
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 2565
End posion on genome 2491
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaagtttgtc
tRNA gene sequence 
GGGCCCATAGCTCAGCCTGGTTAGAGCGACCGGCTCATAACCGGTCGGCCGGGGGTTCAA
ATCCCCTTGGGCCCAgta
Downstream region at tRNA end position 
attataaggg
Secondary structure (Cloverleaf model)
>WENV180039370	Ile2	CAT
                   c      Agta attataaggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        A      + | | | |     A
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     CGGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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