The detailed information of tRNA gene sequence


Sequence ID>WENV180039441
Genome IDLLBY010070862
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 3277
End posion on genome 3374
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cggcccgcac
tRNA gene sequence 
GGGAATGGGAAGGTTCTGGTGAACCTCGAGGACTTCAAATCCTTCCGTCGGGTGCTGAAA
CCATCCGAGGTGGGTTCGATTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
atcctcccca
Secondary structure (Cloverleaf model)
>WENV180039441	SeC	TCA
                   c      GCCA atcctcccca
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     G   A          T T
                    G     C A C C C     A
      T C T        A      | | | | |     G
    G       T G G A       G T G G G     C
    G       | | | |                 T T
    T       A C C T
      G A          C     CCGTCGGGTGCTGAAACCATCCGAG
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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