The detailed information of tRNA gene sequence


Sequence ID>WENV180039563
Genome IDLLBY010094397
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 215
End posion on genome 304
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccttctgcgc
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCTAAGGAGAACGCCTCGAAAGCGTTTGTGGGTGCAAGCCCA
CCGAGGGTTCAAATCCCTCCGCCACCGCCA
Downstream region at tRNA end position 
gccagccagt
Secondary structure (Cloverleaf model)
>WENV180039563	Ser	CGA
                   c      GCCA gccagccagt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGTGGGTGCAAGCCCACC
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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