The detailed information of tRNA gene sequence


Sequence ID>WENV180039639
Genome IDLLBY010109711
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 738
End posion on genome 651
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacaacccac
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGACGATTGCGCCGGTCTTGAAAACCGGAGAGCCGAAAGGTTCC
GTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ttctttccgg
Secondary structure (Cloverleaf model)
>WENV180039639	Ser	TGA
                   c      GCCA ttctttccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     AGAGCCGAAAGGTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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