The detailed information of tRNA gene sequence


Sequence ID>WENV180039670
Genome IDLLBY010120459
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 955
End posion on genome 856
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggatcgcgac
tRNA gene sequence 
GGAAGCGCGCGGGGGCTGGTGTCTCCCCCGGTCTTCAAAACCGGTGTCCGGCGCCCCTCG
AGGCGGCGGAGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
ggttcctacc
Secondary structure (Cloverleaf model)
>WENV180039670	SeC	TCA
                   c      GCCA ggttcctacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    G     T A C C C     A
      T C G        C      + | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G T          C     TGTCCGGCGCCCCTCGAGGCGGCGGAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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